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Blog for the Journal of Open Source Software • <a href='https://joss.theoj.org'>https://joss.theoj.org</a>
Site URL: blog.joss.theoj.org/
Feed URL: blog.joss.theoj.org/feed.xml
Posts: 8
Followers: 2
JOSSCast #10: Defect Structure Searching – Irea Mosquera-Lois and Seán Kavanagh on ShakeNBreak
https://blog.joss.theoj.org/2024/05/josscast-10-defect-structure-searching
Published: May 16, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Irea Mosquera-Lois and Seán Kavanagh join Arfon and Abby to discuss releasing software based on important research observations, earning a PhD, and building ShakeNBreak, a defect structure searching method that…
JOSSCast #9: Reproducibility in Neuroscience – Mats van Es on FieldTrip reproducescript
https://blog.joss.theoj.org/2024/05/josscast-9-reproducibility-in-neuroscience
Published: May 2, 2024 04:00
Subscribe Now: Apple, Spotify, YouTube, RSS Mats van Es joins Arfon and Abby to discuss reproducible science and the functionality he added to FieldTrip, a MATLAB software toolbox for analyzing brain imaging data. Mats is a cognitive neuroscientist at the…
JOSSCast #8: Deep Learning for 3D Protein Structure Predictions – Giulia Crocioni on DeepRank2
https://blog.joss.theoj.org/2024/04/josscast-8-deep-learning-for-3d-protein-structure-predictions
Published: April 18, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Giulia Crocioni joins Arfon and Abby to discuss DeepRank2, a deep learning framework for 3D protein structure predictions. Giulia is a Research Software Engineer at the Netherlands eScience Center where she uses…
JOSSCast #7: Adding defect analysis to the Materials Project – Jimmy Shen on pymatgen-analysis-defects
https://blog.joss.theoj.org/2024/04/josscast-7-adding-defect-analysis-to-the-materials-project
Published: April 4, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Jimmy Shen sat down with Arfon and Abby to discuss the role of defect analysis in semiconductor research, the Materials Project, and the development of pymatgen-analysis-defects. Jimmy is a postdoc at the…
JOSSCast #6: Streamlining Molecular Dynamics – Marjan Albooyeh and Chris Jones on FlowerMD
https://blog.joss.theoj.org/2024/03/josscast-6-streamlining-molecular-dynamics
Published: March 21, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Marjan Albooyeh and Chris Jones chat with Arfon and Abby about their experience building FlowerMD, an open-source library of recipes for molecular dynamics workflows. Marjan and Chris are both grad students in…
JOSSCast #5: Rewrite in Rust – Gui Castelão and Luiz Irber on Gibbs SeaWater Oceanographic Toolbox in Rust
https://blog.joss.theoj.org/2024/03/josscast-5-rewrite-in-rust
Published: March 7, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Gui Castelão and Luiz Irber join Arfon and Abby to discuss their work implementing the Gibbs Sea Water Oceanographic Toolbox of TEOS-10 in Rust, and the role of instrument builders in science. Gui is an…
JOSSCast #4: Applying ML to Quantum Monte Carlo simulations – Nicolas Renaud on QMCTorch
Published: February 22, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Nicolas Renaud joins Arfon and Abby to discuss QMCTorch, a PyTorch implementation of real-space Quantum Monte-Carlo simulations of molecular systems, and work to promote research software as a research output.…
JOSSCast #3: Studying Superbugs – Juliette Hayer on Baargin
https://blog.joss.theoj.org/2024/02/josscast-3-studying-superbugs-juliette-hayer-on-baargin
Published: February 8, 2024 00:00
Subscribe Now: Apple, Spotify, YouTube, RSS Juliette Hayer joins Arfon and Abby to discuss Baargin, an open source tool she created to analyze bacterial genomes, especially those resistant to antibiotics. Juliette is a PhD Researcher at the French Research…